Detailed entry information

Protein Information (annotations from UniProt)

Database IDHIV0001871
UniProt IDO43312
Primary gene name(s)MTSS1
Synonym gene name(s)KIAA0429, MIM
Protein nameMetastasis suppressor protein 1
Protein functionMay be related to cancer progression or tumor metastasis in a variety of organ sites, most likely through an interaction with the actin cytoskeleton.
Subcellular locationCytoplasm, cytoskeleton.
ECO codeClick here for more information.
Amino acid sequence
FASTA format: O43312
Gene Ontology
(Biological Process)
Complete annatation
actin cytoskeleton organization [GO:0030036];
cell adhesion [GO:0007155];
cellular response to fluid shear stress [GO:0071498];
epithelial cell proliferation involved in renal tubule morphogenesis [GO:2001013];
glomerulus morphogenesis [GO:0072102];
microspike assembly [GO:0030035];
movement of cell or subcellular component [GO:0006928];
negative regulation of epithelial cell proliferation [GO:0050680];
nephron tubule epithelial cell differentiation [GO:0072160];
plasma membrane organization [GO:0007009];
renal tubule morphogenesis [GO:0061333];
transmembrane receptor protein tyrosine kinase signaling pathway [GO:0007169]
Gene Ontology
(Molecular Function)
Complete annatation
actin monomer binding [GO:0003785];
identical protein binding [GO:0042802];
receptor binding [GO:0005102]
Gene Ontology
(Cellular Component)
Complete annatation
actin cytoskeleton [GO:0015629];
cytoplasm [GO:0005737];
endocytic vesicle [GO:0030139];
ruffle [GO:0001726]
Protein-protein interaction115132
Phylogenetic treeO43312
HIV replication factor status Zhou et al., Cell. Host. Microbe., 2008
      unknown
Brass et al., Science, 2008
      unknown
Smith et al., J. Immunol, 2010
      unknown
Interferon-stimulated
gene status
Lu et al., J. Virol., 2011
      Folds changes 8h: unknown; Folds changes 16h: unknown; Tested: unknown;
Schoggins JW and Rice CM, Curr. Opin. Virol., 2011
      Targeted viruses: unknown
      Viral life cycle: unknown
      Mechanism related to antiviral activity: unknown
Anti-viral restriction factor Liu et al., Retrovirology, 2011
      unknown (Triplicates)

Gene Expression Profile       top

            Up-regulated;            Down-regulated

For brief introduction to each study, please go to the help page.

Gene expression during HIV latency

(1). Mohammadi et al., PLoS Pathog., 2014

Differentially expressed transcripts (Pairwise) during latency and subsequent viral reactivation using several agents - Primary CD4+ T-cell based model


DMSO: Dimethyl suloxyde (negative control) - 0.0033% final
SAHA: Vorinostat (Histone deacetylase inhibitor) - 0.5 μM
CD3: TCR Stimulation by IL-2+ antiCD3/anti-CD28 antibodies
IL7: Interleukin-7 based stimulation
DISU: Disulfiram (alcohol dehydrogenase inhibitor) - 0.5 μM
AZA: 5-azacytidine (AZA; DNA methylation inhibitor) - 1 μM
Experimental Condition Log2 Fold Change P value Adjusted P value
AZA vs. CD3-0.2097725263299930.7206866036973540.802776831536401
AZA vs. DISU-0.5769259791543680.0653317917224050.56050735823764
AZA vs. IL7-0.4493064553662380.02146882622839240.468984953247187
AZA vs. SAHA-1.183376909526480.000612312257703640.0147444009147359
DISU vs. CD3-0.3802683840826590.5845576707264980.698577089846003
DISU vs. IL70.1178587018498790.7068767921586180.924452818755198
DISU vs. SAHA-0.6054121452462320.2050769938290780.578826732409034
DMSO vs. AZA0.002491238947183440.9883085808107531
DMSO vs. CD30.1988018790742210.731959475754060.805535064813713
DMSO vs. DISU0.5770568140022970.06076546637433480.474720361980936
DMSO vs. IL7-0.4443659560107970.01498405854238280.256395780393214
DMSO vs. SAHA-1.191730580374850.0004516074272391530.0101433316481688
HIV vs. Mock in Activation1.244565893941450.2459700443138110.999983755607037
HIV vs. Mock in Latency0.1002377776869970.5482768804017580.999834320637052
IL7 vs. CD3-0.2333472979426480.686409094677870.786726810438714
SAHA vs. CD3-0.9989757035614170.1215046218146530.203679049026343
SAHA vs. IL7-0.7380196680072170.02804647638575660.124491338350676
(2). Iglesias-Ussel et al., J. Virol., 2013

Up and Downregulated transcripts during Latency (Latently infected CD4+ T cells vs Uninfected)- Primary CD4+Tcell based model
Log2 Fold Change P Value
unknown unknown

Gene expression during HIV infection and replication

(1). Imbeault et al., PloS Pathog., 2012

Transcriptomic profiling of HIV-1 infected CD4+ T cells - Primary CD4+ T cells
Experiment type Log2 Fold Change P Value Adjusted P Value
Infected vs. Mock unknown unknown unknown
Infected vs. Bystander unknown unknown unknown
(2). Lefebvre et al., J. Virol., 2011

Transcriptome analysis of T-cell line (Sup T1)
Log2 Fold Change unknown
(3). Li et al., J. Immunol., 2013

Lymphatic tissue
Acute Fold Change Acute P Value Asymt Fold Change Asypt P Value AIDS Fold Change AIDS P Value
unknown unknown unknown unknown unknown unknown
(4). Chang et al., MBio., 2011

Transcriptome analysis of T-cell line (Sup T1)

Derived from Sherrill-Mix et al., BMC Retrovirol., 2015 cross validation
Up-regulated (True) TRUE
(5). Sherrill-Mix et al., BMC Retrovirol., 2015

Deep RNA-seq analysis of primary human T cell infected with low passage HIV isolate HIV89.6 - Primary CD4+ T cell based
Test Status Log2 Fold Change P Value
OK -0.451456 0.022801
(6). Rotger et al., PLoS Pathog., 2010

Genome-wide mRNA expression of CD4+ T cells from HIV-infected patient
(Genes differentially expressed (at adjusted p<0.01) according to the empirical Bayes approach)
Log2 Fold Change P Value
unknown unknown

Proteomic/Transcriptomics studies indicating differentially expressed genes mediated by HIV

(1). Greenwood et al., Elife, 2016

Activated (CD3/CD28) Primary human CD4+ T cells infected with pNL4-3-dE-EGFP. The table shows the complete (unfiltered) TMT (tandem mass tag)-based proteomic time course dataset
6 h 24 h 48 h 72 h RTi
unknown unknown unknown unknown unknown
(2). Navare et al., Virology, 2012

SUP-T1 cell line
FC-4hpi P-value FC-8hpi P-value FC-20hpi P-value Category
unknown unknown unknown unknown unknown unknown unknown
(3). Hyrcza et al., J. Virolo., 2007

Primary human CD4+ and CD8+ T Cells
Affymetrix Prob ID Fold Change In CD8? Category
unknown unknown unknown unknown

Protein Overview       top

Drug-protein Interaction       (annotations from DrugBank)      top

not found

Protein Secondary Structure       (annotations from PDB)      top

PDB Accession Method Resolution Chain Structure Preview
2D1K X-ray 2.5Å C=724-755.

HIV-1 Interaction       (annotations from NCBI HIV-1 Interaction Database)      top

not found

Metabolic/Signalling Pathway       (annotations from KEGG database)      top

Pathway Accession Number Description
not found
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