Detailed entry information

Protein Information (annotations from UniProt)

Database IDHIV0001130
UniProt IDQ86SF2
Primary gene name(s)GALNT7
Synonym gene name(s)unknown
Protein nameN-acetylgalactosaminyltransferase 7
Protein functionGlycopeptide transferase involved in O-linked oligosaccharide biosynthesis, which catalyzes the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide. In contrast to other proteins of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on the protein receptor, but instead requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified.
Subcellular locationGolgi apparatus membrane {ECO:0000250};
Single-pass type II membrane protein {ECO:0000250}.
ECO codeClick here for more information.
Amino acid sequence
FASTA format: Q86SF2
Gene Ontology
(Biological Process)
Complete annatation
carbohydrate metabolic process [GO:0005975];
O-glycan processing [GO:0016266];
protein O-linked glycosylation [GO:0006493]
Gene Ontology
(Molecular Function)
Complete annatation
carbohydrate binding [GO:0030246];
metal ion binding [GO:0046872];
polypeptide N-acetylgalactosaminyltransferase activity [GO:0004653]
Gene Ontology
(Cellular Component)
Complete annatation
extracellular exosome [GO:0070062];
Golgi membrane [GO:0000139];
integral component of membrane [GO:0016021];
membrane [GO:0016020]
Protein-protein interaction119735
Phylogenetic treeQ86SF2
HIV replication factor status Zhou et al., Cell. Host. Microbe., 2008
Brass et al., Science, 2008
Smith et al., J. Immunol, 2010
gene status
Lu et al., J. Virol., 2011
      Folds changes 8h: unknown; Folds changes 16h: unknown; Tested: unknown;
Schoggins JW and Rice CM, Curr. Opin. Virol., 2011
      Targeted viruses: unknown
      Viral life cycle: unknown
      Mechanism related to antiviral activity: unknown
Anti-viral restriction factor Liu et al., Retrovirology, 2011
      unknown (Triplicates)

Gene Expression Profile       top

            Up-regulated;            Down-regulated

For brief introduction to each study, please go to the help page.

Gene expression during HIV latency

(1). Mohammadi et al., PLoS Pathog., 2014

Differentially expressed transcripts (Pairwise) during latency and subsequent viral reactivation using several agents - Primary CD4+ T-cell based model

DMSO: Dimethyl suloxyde (negative control) - 0.0033% final
SAHA: Vorinostat (Histone deacetylase inhibitor) - 0.5 μM
CD3: TCR Stimulation by IL-2+ antiCD3/anti-CD28 antibodies
IL7: Interleukin-7 based stimulation
DISU: Disulfiram (alcohol dehydrogenase inhibitor) - 0.5 μM
AZA: 5-azacytidine (AZA; DNA methylation inhibitor) - 1 μM
Experimental Condition Log2 Fold Change P value Adjusted P value
AZA vs. CD30.878939183206230.008084780085731880.0217907377418009
AZA vs. DISU-0.2233651987925380.3801644969079480.899505298702967
AZA vs. IL70.0009469040043905560.996110492922620.999311006273513
AZA vs. SAHA-0.3549440172865120.1508135276016830.494747141472854
DISU vs. CD3-1.115130058619720.002556602309601640.00924621478285392
DISU vs. IL70.2159980702270910.3941153135167620.759561282442493
DISU vs. SAHA-0.1316148476308970.6538251617268320.893038170852588
DMSO vs. AZA-0.02447556125305390.8854928867575561
DMSO vs. CD3-0.9170261680637390.004657876676927960.0128943241708783
DMSO vs. DISU0.1966265452597950.4232072088253370.878949015915157
DMSO vs. IL70.03290143987727270.8563559444405920.968386907391938
DMSO vs. SAHA-0.3376160984683590.1574615722468230.479027726146925
HIV vs. Mock in Activation-0.04230571910740480.9457868459120050.999983755607037
HIV vs. Mock in Latency-0.04549774829260730.7853019711156150.999834320637052
IL7 vs. CD3-0.8686697877434130.007561541740438440.0237398705798018
SAHA vs. CD3-1.259745031071050.0005612784442785570.00216273744701556
SAHA vs. IL7-0.3609524959652230.1434992924951170.357368498210176
(2). Iglesias-Ussel et al., J. Virol., 2013

Up and Downregulated transcripts during Latency (Latently infected CD4+ T cells vs Uninfected)- Primary CD4+Tcell based model
Log2 Fold Change P Value
unknown unknown

Gene expression during HIV infection and replication

(1). Imbeault et al., PloS Pathog., 2012

Transcriptomic profiling of HIV-1 infected CD4+ T cells - Primary CD4+ T cells
Experiment type Log2 Fold Change P Value Adjusted P Value
Infected vs. Mock unknown unknown unknown
Infected vs. Bystander unknown unknown unknown
(2). Lefebvre et al., J. Virol., 2011

Transcriptome analysis of T-cell line (Sup T1)
Log2 Fold Change -1.168835622
(3). Li et al., J. Immunol., 2013

Lymphatic tissue
Acute Fold Change Acute P Value Asymt Fold Change Asypt P Value AIDS Fold Change AIDS P Value
unknown unknown unknown unknown unknown unknown
(4). Chang et al., MBio., 2011

Transcriptome analysis of T-cell line (Sup T1)

Derived from Sherrill-Mix et al., BMC Retrovirol., 2015 cross validation
Up-regulated (True) FALSE
(5). Sherrill-Mix et al., BMC Retrovirol., 2015

Deep RNA-seq analysis of primary human T cell infected with low passage HIV isolate HIV89.6 - Primary CD4+ T cell based
Test Status Log2 Fold Change P Value
OK 0.00525932 0.982429
(6). Rotger et al., PLoS Pathog., 2010

Genome-wide mRNA expression of CD4+ T cells from HIV-infected patient
(Genes differentially expressed (at adjusted p<0.01) according to the empirical Bayes approach)
Log2 Fold Change P Value
unknown unknown

Proteomic/Transcriptomics studies indicating differentially expressed genes mediated by HIV

(1). Greenwood et al., Elife, 2016

Activated (CD3/CD28) Primary human CD4+ T cells infected with pNL4-3-dE-EGFP. The table shows the complete (unfiltered) TMT (tandem mass tag)-based proteomic time course dataset
6 h 24 h 48 h 72 h RTi
0.948 1.336 1.564 1.443 1.466
(2). Navare et al., Virology, 2012

SUP-T1 cell line
FC-4hpi P-value FC-8hpi P-value FC-20hpi P-value Category
unknown unknown unknown unknown unknown unknown unknown
(3). Hyrcza et al., J. Virolo., 2007

Primary human CD4+ and CD8+ T Cells
Affymetrix Prob ID Fold Change In CD8? Category
unknown unknown unknown unknown

Protein Overview       top

Drug-protein Interaction       (annotations from DrugBank)      top

not found

Protein Secondary Structure       (annotations from PDB)      top

not found

HIV-1 Interaction       (annotations from NCBI HIV-1 Interaction Database)      top

not found

Metabolic/Signalling Pathway       (annotations from KEGG database)      top

Pathway Accession Number Description
hsa00512 Mucin type O-glycan biosynthesis - Homo sapiens (human)
hsa01100 Metabolic pathways - Homo sapiens (human)