Detailed entry information

Protein Information (annotations from UniProt)

Database IDHIV0000827
UniProt IDQ8TDJ6
Primary gene name(s)DMXL2
Synonym gene name(s)KIAA0856
Protein nameDmX-like protein 2
Protein functionMay serve as a scaffold protein for MADD and RAB3GA on synaptic vesicles, PubMed:11809763. Plays a role in the brain as a key controller of neuronal and endocrine homeostatic processes, By similarity. {ECO:0000250|UniProtKB:Q8BPN8, ECO:0000269|PubMed:11809763}.
Subcellular locationCytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane {ECO:0000269|PubMed:11809763};
Peripheral membrane protein {ECO:0000269|PubMed:11809763}. Note=The external layer of the inferior boundary for the hypothalamus part of the human brain, the so called median eminence, ME displayed a punctate pattern of expression;
expression also observed in the cell bodies lining the third ventricle, in the long processes extending from these cell bodies toward the external layer of the ME, in small clear vesicles, and in large dense core vesicles. {ECO:0000250|UniProtKB:Q8BPN8}.
ECO codeClick here for more information.
Amino acid sequence
FASTA format: Q8TDJ6
Gene Ontology
(Biological Process)
Complete annatation
vacuolar acidification [GO:0007035];
vacuolar proton-transporting V-type ATPase complex assembly [GO:0070072]
Gene Ontology
(Molecular Function)
Complete annatation
Rab GTPase binding [GO:0017137]
Gene Ontology
(Cellular Component)
Complete annatation
cell junction [GO:0030054];
extracellular space [GO:0005615];
synaptic vesicle [GO:0008021];
synaptic vesicle membrane [GO:0030672]
Protein-protein interaction116903
Phylogenetic treeQ8TDJ6
HIV replication factor status Zhou et al., Cell. Host. Microbe., 2008
Brass et al., Science, 2008
Smith et al., J. Immunol, 2010
gene status
Lu et al., J. Virol., 2011
      Folds changes 8h: unknown; Folds changes 16h: unknown; Tested: unknown;
Schoggins JW and Rice CM, Curr. Opin. Virol., 2011
      Targeted viruses: unknown
      Viral life cycle: unknown
      Mechanism related to antiviral activity: unknown
Anti-viral restriction factor Liu et al., Retrovirology, 2011
      unknown (Triplicates)

Gene Expression Profile       top

            Up-regulated;            Down-regulated

For brief introduction to each study, please go to the help page.

Gene expression during HIV latency

(1). Mohammadi et al., PLoS Pathog., 2014

Differentially expressed transcripts (Pairwise) during latency and subsequent viral reactivation using several agents - Primary CD4+ T-cell based model

DMSO: Dimethyl suloxyde (negative control) - 0.0033% final
SAHA: Vorinostat (Histone deacetylase inhibitor) - 0.5 μM
CD3: TCR Stimulation by IL-2+ antiCD3/anti-CD28 antibodies
IL7: Interleukin-7 based stimulation
DISU: Disulfiram (alcohol dehydrogenase inhibitor) - 0.5 μM
AZA: 5-azacytidine (AZA; DNA methylation inhibitor) - 1 μM
Experimental Condition Log2 Fold Change P value Adjusted P value
AZA vs. CD3-0.8155112432520860.4269172925411230.548185330283239
AZA vs. DISU-0.06714841544886560.8440242380696620.987490015884981
AZA vs. IL70.4069936275577450.3416390390885630.999311006273513
AZA vs. SAHA0.3344799918022360.3950884444316290.756500459977107
DISU vs. CD30.7352662695630470.4702369363436580.598476154883849
DISU vs. IL70.4658970393676410.3127166980083680.696028971279515
DISU vs. SAHA0.4017461583464410.3508503972401260.728802179322043
DMSO vs. AZA-0.02775079648895730.9206415661102131
DMSO vs. CD30.7764170619084320.4459998149993390.558148131995767
DMSO vs. DISU0.03758768169114180.9089937233294130.988283279918411
DMSO vs. IL70.4416564376411840.2917889872834070.779442970829039
DMSO vs. SAHA0.3540017858320350.3541053525802730.703521964277433
HIV vs. Mock in Activation0.09206688560231980.9618861499154550.999983755607037
HIV vs. Mock in Latency-0.215155681205010.2357753910951930.999834320637052
IL7 vs. CD31.233115151422950.2312100102617070.360389346900927
SAHA vs. CD31.124051315320370.2739741435990750.386265351673502
SAHA vs. IL7-0.07820272911720360.8746907294426930.94933232642886
(2). Iglesias-Ussel et al., J. Virol., 2013

Up and Downregulated transcripts during Latency (Latently infected CD4+ T cells vs Uninfected)- Primary CD4+Tcell based model
Log2 Fold Change P Value
unknown unknown

Gene expression during HIV infection and replication

(1). Imbeault et al., PloS Pathog., 2012

Transcriptomic profiling of HIV-1 infected CD4+ T cells - Primary CD4+ T cells
Experiment type Log2 Fold Change P Value Adjusted P Value
Infected vs. Mock unknown unknown unknown
Infected vs. Bystander unknown unknown unknown
(2). Lefebvre et al., J. Virol., 2011

Transcriptome analysis of T-cell line (Sup T1)
Log2 Fold Change unknown
(3). Li et al., J. Immunol., 2013

Lymphatic tissue
Acute Fold Change Acute P Value Asymt Fold Change Asypt P Value AIDS Fold Change AIDS P Value
unknown unknown unknown unknown unknown unknown
(4). Chang et al., MBio., 2011

Transcriptome analysis of T-cell line (Sup T1)

Derived from Sherrill-Mix et al., BMC Retrovirol., 2015 cross validation
Up-regulated (True) TRUE
(5). Sherrill-Mix et al., BMC Retrovirol., 2015

Deep RNA-seq analysis of primary human T cell infected with low passage HIV isolate HIV89.6 - Primary CD4+ T cell based
Test Status Log2 Fold Change P Value
OK 0.260612 0.293216
(6). Rotger et al., PLoS Pathog., 2010

Genome-wide mRNA expression of CD4+ T cells from HIV-infected patient
(Genes differentially expressed (at adjusted p<0.01) according to the empirical Bayes approach)
Log2 Fold Change P Value
unknown unknown

Proteomic/Transcriptomics studies indicating differentially expressed genes mediated by HIV

(1). Greenwood et al., Elife, 2016

Activated (CD3/CD28) Primary human CD4+ T cells infected with pNL4-3-dE-EGFP. The table shows the complete (unfiltered) TMT (tandem mass tag)-based proteomic time course dataset
6 h 24 h 48 h 72 h RTi
1.159 1.635 2.062 1.822 1.754
(2). Navare et al., Virology, 2012

SUP-T1 cell line
FC-4hpi P-value FC-8hpi P-value FC-20hpi P-value Category
unknown unknown unknown unknown unknown unknown unknown
(3). Hyrcza et al., J. Virolo., 2007

Primary human CD4+ and CD8+ T Cells
Affymetrix Prob ID Fold Change In CD8? Category
unknown unknown unknown unknown

Protein Overview       top

Drug-protein Interaction       (annotations from DrugBank)      top

not found

Protein Secondary Structure       (annotations from PDB)      top

not found

HIV-1 Interaction       (annotations from NCBI HIV-1 Interaction Database)      top

not found

Metabolic/Signalling Pathway       (annotations from KEGG database)      top

Pathway Accession Number Description
not found