Detailed entry information

Protein Information (annotations from UniProt)

Database IDHIV0000116
UniProt IDQ7Z5R6
Primary gene name(s)APBB1IP
Synonym gene name(s)PREL1, RARP1, RIAM
Protein nameAmyloid beta A4 precursor protein-binding family B member 1-interacting protein
Protein functionAppears to function in the signal transduction from Ras activation to actin cytoskeletal remodeling. Suppresses insulin-induced promoter activities through AP1 and SRE. Mediates Rap1-induced adhesion. {ECO:0000269|PubMed:14530287, ECO:0000269|PubMed:15469846}.
Subcellular locationCell membrane {ECO:0000250};
Peripheral membrane protein {ECO:0000250}. Cell projection, lamellipodium {ECO:0000250}. Cell junction, focal adhesion {ECO:0000250}. Cytoplasm, cytoskeleton {ECO:0000250}. Note=Colocalizes with ENA/VASP proteins at lamellipodia tips and focal adhesions, and F-actin at the leading edge. At the membrane surface, associates, via the PH domain, preferentially with the inositol phosphates, PtdIns(5P and PtdIns(3P. This binding appears to be necessary for the efficient interaction of the RA domain to Ras-GTPases, By similarity. {ECO:0000250}.
ECO codeClick here for more information.
Amino acid sequence
FASTA format: Q7Z5R6
Gene Ontology
(Biological Process)
Complete annatation
positive regulation of cell adhesion [GO:0045785];
signal transduction [GO:0007165];
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell [GO:0002291]
Gene Ontology
(Molecular Function)
Complete annatation
unknown
Gene Ontology
(Cellular Component)
Complete annatation
cytoskeleton [GO:0005856];
cytosol [GO:0005829];
focal adhesion [GO:0005925];
lamellipodium [GO:0030027];
T cell receptor complex [GO:0042101]
Protein-protein interaction120012
Phylogenetic treeQ7Z5R6
HIV replication factor status Zhou et al., Cell. Host. Microbe., 2008
      unknown
Brass et al., Science, 2008
      unknown
Smith et al., J. Immunol, 2010
      unknown
Interferon-stimulated
gene status
Lu et al., J. Virol., 2011
      Folds changes 8h: unknown; Folds changes 16h: unknown; Tested: unknown;
Schoggins JW and Rice CM, Curr. Opin. Virol., 2011
      Targeted viruses: unknown
      Viral life cycle: unknown
      Mechanism related to antiviral activity: unknown
Anti-viral restriction factor Liu et al., Retrovirology, 2011
      unknown (Triplicates)

Gene Expression Profile       top

            Up-regulated;            Down-regulated

For brief introduction to each study, please go to the help page.

Gene expression during HIV latency

(1). Mohammadi et al., PLoS Pathog., 2014

Differentially expressed transcripts (Pairwise) during latency and subsequent viral reactivation using several agents - Primary CD4+ T-cell based model


DMSO: Dimethyl suloxyde (negative control) - 0.0033% final
SAHA: Vorinostat (Histone deacetylase inhibitor) - 0.5 μM
CD3: TCR Stimulation by IL-2+ antiCD3/anti-CD28 antibodies
IL7: Interleukin-7 based stimulation
DISU: Disulfiram (alcohol dehydrogenase inhibitor) - 0.5 μM
AZA: 5-azacytidine (AZA; DNA methylation inhibitor) - 1 μM
Experimental Condition Log2 Fold Change P value Adjusted P value
AZA vs. CD3-0.9467921198500310.004123714835058690.0123563876727643
AZA vs. DISU-0.2198049361473550.3847069971020540.900337412562701
AZA vs. IL7-0.05879451154105450.7598476016304030.999311006273513
AZA vs. SAHA-0.4873040874943140.04725387901484550.262069526221406
DISU vs. CD30.7152856600562580.04936542422382220.106869798183239
DISU vs. IL70.1513349908483870.5482992225071880.852740202135135
DISU vs. SAHA-0.2657726320646510.3645478695896010.738254246238907
DMSO vs. AZA-0.08222609892170640.6235350877169121
DMSO vs. CD30.856500123567410.007789232216897760.0200898447778745
DMSO vs. DISU0.1366339791979650.5753714876569260.931469777531738
DMSO vs. IL70.0301831565050670.8666796071157220.970618094663316
DMSO vs. SAHA-0.4120640926572970.08185816949339630.333789088862277
HIV vs. Mock in Activation-0.05562788277025530.9287525595401730.999983755607037
HIV vs. Mock in Latency-0.05854425974252160.7233080644872840.999834320637052
IL7 vs. CD30.8946353786878750.005732761237078220.0188092969365433
SAHA vs. CD30.435462309148430.2203363164711880.325759667342373
SAHA vs. IL7-0.4312391191071710.0773855361257810.245219586201392
(2). Iglesias-Ussel et al., J. Virol., 2013

Up and Downregulated transcripts during Latency (Latently infected CD4+ T cells vs Uninfected)- Primary CD4+Tcell based model
Log2 Fold Change P Value
unknown unknown

Gene expression during HIV infection and replication

(1). Imbeault et al., PloS Pathog., 2012

Transcriptomic profiling of HIV-1 infected CD4+ T cells - Primary CD4+ T cells
Experiment type Log2 Fold Change P Value Adjusted P Value
Infected vs. Mock unknown unknown unknown
Infected vs. Bystander unknown unknown unknown
(2). Lefebvre et al., J. Virol., 2011

Transcriptome analysis of T-cell line (Sup T1)
Log2 Fold Change unknown
(3). Li et al., J. Immunol., 2013

Lymphatic tissue
Acute Fold Change Acute P Value Asymt Fold Change Asypt P Value AIDS Fold Change AIDS P Value
unknown unknown unknown unknown unknown unknown
(4). Chang et al., MBio., 2011

Transcriptome analysis of T-cell line (Sup T1)

Derived from Sherrill-Mix et al., BMC Retrovirol., 2015 cross validation
Up-regulated (True) FALSE
(5). Sherrill-Mix et al., BMC Retrovirol., 2015

Deep RNA-seq analysis of primary human T cell infected with low passage HIV isolate HIV89.6 - Primary CD4+ T cell based
Test Status Log2 Fold Change P Value
OK -0.551769 0.000305467
(6). Rotger et al., PLoS Pathog., 2010

Genome-wide mRNA expression of CD4+ T cells from HIV-infected patient
(Genes differentially expressed (at adjusted p<0.01) according to the empirical Bayes approach)
Log2 Fold Change P Value
unknown unknown

Proteomic/Transcriptomics studies indicating differentially expressed genes mediated by HIV

(1). Greenwood et al., Elife, 2016

Activated (CD3/CD28) Primary human CD4+ T cells infected with pNL4-3-dE-EGFP. The table shows the complete (unfiltered) TMT (tandem mass tag)-based proteomic time course dataset
6 h 24 h 48 h 72 h RTi
0.972 1.289 1.193 1.041 1.219
(2). Navare et al., Virology, 2012

SUP-T1 cell line
FC-4hpi P-value FC-8hpi P-value FC-20hpi P-value Category
unknown unknown unknown unknown unknown unknown unknown
(3). Hyrcza et al., J. Virolo., 2007

Primary human CD4+ and CD8+ T Cells
Affymetrix Prob ID Fold Change In CD8? Category
unknown unknown unknown unknown

Protein Overview       top

Drug-protein Interaction       (annotations from DrugBank)      top

not found

Protein Secondary Structure       (annotations from PDB)      top

PDB Accession Method Resolution Chain Structure Preview
2MWN NMR - A=7-30.
3ZDL X-ray 2.3Å B=1-31.

HIV-1 Interaction       (annotations from NCBI HIV-1 Interaction Database)      top

not found

Metabolic/Signalling Pathway       (annotations from KEGG database)      top

Pathway Accession Number Description
hsa04015 Rap1 signaling pathway - Homo sapiens (human)
hsa04611 Platelet activation - Homo sapiens (human)
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